Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | RAM_RS21615 | Not Available | Positive | 4705077 - 4706297 | 42749.5 |
| taud/tfda dioxygenase family protein | RAM_RS21620 | Not Available | Negative | 4706340 - 4707236 | 33040.9 |
| llm class flavin-dependent oxidoreductase | RAM_RS21625 | Not Available | Negative | 4707233 - 4708546 | 48264.9 |
| abc transporter permease | RAM_RS21630 | Not Available | Negative | 4708543 - 4709385 | 30269.7 |
| abc transporter atp-binding protein | RAM_RS21635 | Not Available | Negative | 4709382 - 4710155 | 28215.8 |
| abc transporter substrate-binding protein | RAM_RS21640 | Not Available | Negative | 4710152 - 4711171 | 36520.3 |
| rok family transcriptional regulator | RAM_RS21645 | Not Available | Negative | 4711274 - 4712491 | 42044.3 |
| helix-turn-helix transcriptional regulator | RAM_RS21650 | Not Available | Negative | 4712563 - 4713543 | 35508.6 |
| epoxide hydrolase family protein | RAM_RS21655 | Not Available | Positive | 4713597 - 4714733 | 41494.5 |
| dna glycosylase alkz-like family protein | RAM_RS21660 | Not Available | Positive | 4714730 - 4715584 | 31045.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
