Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coce/nond family hydrolase | RAM_RS21520 | Not Available | Positive | 4685678 - 4687702 | 75298.5 |
| nad-dependent epimerase/dehydratase family protein | RAM_RS21525 | Not Available | Positive | 4687737 - 4688810 | 37431.8 |
| phytoene desaturase family protein | RAM_RS21530 | Not Available | Positive | 4688828 - 4690420 | 55926.7 |
| srpbcc family protein | RAM_RS21535 | Not Available | Negative | 4690827 - 4691294 | 16423.7 |
| yihy/virulence factor brkb family protein | RAM_RS21540 | Not Available | Positive | 4691349 - 4692362 | 35877.0 |
| voc family protein | RAM_RS21545 | Not Available | Positive | 4692367 - 4692747 | 13559.1 |
| hypothetical protein | RAM_RS21550 | Not Available | Negative | 4692795 - 4693124 | 12286.4 |
| dna topoisomerase ib | RAM_RS21555 | Not Available | Negative | 4693219 - 4694232 | 37463.8 |
| duf1360 domain-containing protein | RAM_RS21560 | Not Available | Positive | 4694324 - 4694851 | 18133.9 |
| fad-dependent oxidoreductase | RAM_RS21565 | Not Available | Negative | 4694909 - 4696411 | 52769.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
