Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | RAM_RS02000 | Not Available | Positive | 401517 - 402731 | 42640.6 |
| 4-hydroxybenzoate 3-monooxygenase | RAM_RS02005 | Not Available | Positive | 402841 - 403659 | 30356.0 |
| clp protease n-terminal domain-containing protein | RAM_RS02010 | Not Available | Positive | 403712 - 404449 | 25983.1 |
| nadp-dependent phosphogluconate dehydrogenase | RAM_RS02015 | Not Available | Negative | 404573 - 406012 | 51062.0 |
| mbl fold metallo-hydrolase | RAM_RS02020 | Not Available | Negative | 406098 - 407018 | 32980.9 |
| helix-turn-helix domain-containing protein | RAM_RS02025 | Not Available | Positive | 407254 - 408117 | 32457.8 |
| sam-dependent methyltransferase | RAM_RS02030 | Not Available | Positive | 408218 - 409069 | 30486.8 |
| sam-dependent methyltransferase | RAM_RS02035 | Not Available | Positive | 409041 - 409889 | 31269.1 |
| class i sam-dependent methyltransferase | RAM_RS02040 | Not Available | Positive | 409886 - 410494 | 21629.8 |
| hypothetical protein | RAM_RS02045 | Not Available | Negative | 410601 - 410855 | 9583.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
