Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| srpbcc family protein | RAM_RS20985 | Not Available | Negative | 4588169 - 4588642 | 17661.9 |
| bifunctional nuclease family protein | RAM_RS20990 | Not Available | Positive | 4588803 - 4589318 | 18225.9 |
| sigma-70 family rna polymerase sigma factor | RAM_RS20995 | Not Available | Positive | 4589396 - 4590364 | 35251.3 |
| duf2087 domain-containing protein | RAM_RS21000 | Not Available | Negative | 4590328 - 4590807 | 17344.7 |
| fatty acyl-amp ligase | RAM_RS21005 | Not Available | Positive | 4590878 - 4592518 | 57774.3 |
| acyl carrier protein | RAM_RS21010 | Not Available | Positive | 4592511 - 4592774 | 9302.13 |
| hypothetical protein | RAM_RS21015 | Not Available | Positive | 4592771 - 4593088 | 10368.7 |
| wxg100 family type vii secretion target | RAM_RS51100 | Not Available | Positive | 4593088 - 4596408 | 106802.0 |
| hypothetical protein | RAM_RS21025 | Not Available | Positive | 4596417 - 4596782 | 13824.9 |
| class i sam-dependent methyltransferase | RAM_RS21030 | Not Available | Negative | 4596766 - 4597560 | 28272.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
