Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | RAM_RS20890 | Not Available | Positive | 4561543 - 4562823 | 45941.9 |
| sialidase family protein | RAM_RS20895 | Not Available | Negative | 4562917 - 4564410 | 51074.7 |
| yeih family protein | RAM_RS20900 | Not Available | Negative | 4564524 - 4565492 | 31959.2 |
| lysr family transcriptional regulator | RAM_RS20905 | Not Available | Positive | 4565563 - 4566462 | 31434.2 |
| lysr substrate-binding domain-containing protein | RAM_RS20910 | Not Available | Negative | 4566459 - 4567361 | 33108.6 |
| sdr family oxidoreductase | RAM_RS20915 | Not Available | Positive | 4567484 - 4568368 | 30222.7 |
| padr family transcriptional regulator | RAM_RS20920 | Not Available | Positive | 4568436 - 4569278 | 29472.2 |
| class i sam-dependent methyltransferase | RAM_RS20925 | Not Available | Positive | 4569646 - 4570677 | 36544.5 |
| m14 family zinc carboxypeptidase | RAM_RS20930 | Not Available | Negative | 4570679 - 4571998 | 46149.6 |
| hypothetical protein | RAM_RS20935 | Not Available | Negative | 4572122 - 4572631 | 19016.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
