Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RAM_RS20840 | Not Available | Negative | 4552660 - 4553424 | 28307.9 |
| dinb family protein | RAM_RS20845 | Not Available | Negative | 4553424 - 4553930 | 19035.3 |
| atp-dependent dna ligase | RAM_RS20850 | Not Available | Positive | 4554003 - 4555082 | 40411.1 |
| non-homologous end-joining dna ligase | RAM_RS20855 | Not Available | Positive | 4555079 - 4556083 | 36922.0 |
| mfs transporter | RAM_RS20860 | Not Available | Negative | 4556131 - 4557267 | 37454.8 |
| tetr/acrr family transcriptional regulator | RAM_RS20865 | Not Available | Positive | 4557366 - 4557935 | 20633.3 |
| hypothetical protein | RAM_RS20870 | Not Available | Negative | 4557932 - 4558186 | 9098.91 |
| cobw family gtp-binding protein | RAM_RS20875 | Not Available | Negative | 4558253 - 4559278 | 36970.1 |
| nitric oxide synthase oxygenase | RAM_RS20880 | Not Available | Positive | 4559711 - 4560865 | 43348.3 |
| flavodoxin domain-containing protein | RAM_RS20885 | Not Available | Positive | 4560957 - 4561463 | 18182.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
