Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidylate synthase | RAM_RS20645 | Not Available | Positive | 4508570 - 4509367 | 29928.4 |
| dihydrofolate reductase | RAM_RS20650 | Not Available | Positive | 4509364 - 4509822 | 16592.7 |
| gmc family oxidoreductase | RAM_RS20655 | Not Available | Positive | 4510002 - 4511627 | 57731.1 |
| succinic semialdehyde dehydrogenase | RAM_RS20660 | Not Available | Positive | 4511624 - 4513198 | 56115.8 |
| phospholipase d-like domain-containing protein | RAM_RS20665 | Not Available | Negative | 4513202 - 4514659 | 53752.8 |
| nacht domain-containing protein | RAM_RS20670 | Not Available | Positive | 4514746 - 4518009 | 118843.0 |
| pdr/vanb family oxidoreductase | RAM_RS20675 | Not Available | Negative | 4518028 - 4518945 | 32627.0 |
| hypothetical protein | RAM_RS20680 | Not Available | Negative | 4518945 - 4519103 | 6142.31 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | RAM_RS20685 | Not Available | Negative | 4519100 - 4520140 | 37993.7 |
| iclr family transcriptional regulator | RAM_RS20690 | Not Available | Negative | 4520211 - 4520975 | 27387.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
