Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cellulase family glycosylhydrolase | RAM_RS20595 | Not Available | Negative | 4494355 - 4495752 | 49078.9 |
| nad-dependent epimerase/dehydratase family protein | RAM_RS20600 | Not Available | Positive | 4495945 - 4496784 | 28903.3 |
| spoiie family protein phosphatase | RAM_RS20605 | Not Available | Positive | 4496900 - 4499617 | 96287.1 |
| duf6461 domain-containing protein | RAM_RS20610 | Not Available | Positive | 4499636 - 4501279 | 57490.9 |
| alpha/beta fold hydrolase | RAM_RS20615 | Not Available | Negative | 4501263 - 4502966 | 60259.9 |
| hypothetical protein | RAM_RS20620 | Not Available | Negative | 4503091 - 4503609 | 18449.2 |
| llm class flavin-dependent oxidoreductase | RAM_RS20625 | Not Available | Positive | 4503738 - 4504760 | 37612.0 |
| polysaccharide lyase family 7 protein | RAM_RS20630 | Not Available | Negative | 4504798 - 4505562 | 26652.0 |
| catalase/peroxidase hpi | RAM_RS20635 | Not Available | Negative | 4505742 - 4508015 | 82530.4 |
| fur family transcriptional regulator | RAM_RS20640 | Not Available | Negative | 4508012 - 4508464 | 16326.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
