Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| calx-beta domain-containing protein | RAM_RS20445 | Not Available | Negative | 4462882 - 4464756 | 61987.7 |
| nad(p)/fad-dependent oxidoreductase | RAM_RS20450 | Not Available | Negative | 4465065 - 4466303 | 44103.0 |
| fad-dependent oxidoreductase | RAM_RS20455 | Not Available | Negative | 4466309 - 4467850 | 55350.0 |
| class i sam-dependent methyltransferase | RAM_RS20460 | Not Available | Negative | 4467847 - 4468578 | 26057.0 |
| lycopene cyclase domain-containing protein | RAM_RS20465 | Not Available | Negative | 4468575 - 4468895 | 11975.8 |
| lycopene cyclase domain-containing protein | RAM_RS20470 | Not Available | Negative | 4468892 - 4469233 | 12499.7 |
| phytoene/squalene synthase family protein | RAM_RS20475 | Not Available | Negative | 4469234 - 4470196 | 34858.7 |
| phytoene desaturase family protein | RAM_RS20480 | Not Available | Negative | 4470193 - 4471668 | 51898.1 |
| polyprenyl synthetase family protein | RAM_RS20485 | Not Available | Negative | 4471665 - 4472768 | 39542.1 |
| carotenoid biosynthesis protein | RAM_RS20490 | Not Available | Positive | 4473139 - 4473957 | 28466.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
