Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | RAM_RS20055 | Not Available | Negative | 4350586 - 4351185 | 21129.3 |
| membrane protein | RAM_RS20060 | Not Available | Positive | 4351306 - 4351866 | 19038.6 |
| glycoside hydrolase family 6 protein | RAM_RS20065 | Not Available | Negative | 4351854 - 4353197 | 45788.9 |
| ricin-type beta-trefoil lectin domain protein | RAM_RS20070 | Not Available | Positive | 4353668 - 4356022 | 82104.0 |
| arabinofuranosidase catalytic domain-containing protein | RAM_RS20075 | Not Available | Positive | 4356075 - 4357502 | 48045.1 |
| non-reducing end alpha-l-arabinofuranosidase family hydrolase | RAM_RS20080 | Not Available | Positive | 4357532 - 4359931 | 84741.2 |
| nad(p)-dependent alcohol dehydrogenase | RAM_RS20085 | Not Available | Negative | 4360040 - 4361086 | 36793.9 |
| tetr family transcriptional regulator | RAM_RS20090 | Not Available | Positive | 4361186 - 4361773 | 21545.9 |
| long-chain fatty acid--coa ligase | RAM_RS20095 | Not Available | Positive | 4361975 - 4363588 | 57710.3 |
| helix-turn-helix domain-containing protein | RAM_RS20100 | Not Available | Negative | 4363595 - 4365283 | 60117.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
