Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc-binding dehydrogenase | RAM_RS20010 | Not Available | Negative | 4339111 - 4340061 | 31391.6 |
| tetr/acrr family transcriptional regulator | RAM_RS20015 | Not Available | Positive | 4340148 - 4340735 | 21400.8 |
| alpha/beta hydrolase | RAM_RS20020 | Not Available | Positive | 4340791 - 4341528 | 26352.9 |
| tetr/acrr family transcriptional regulator | RAM_RS20025 | Not Available | Positive | 4341525 - 4342106 | 20409.4 |
| glycosyl hydrolase family 95 catalytic domain-containing protein | RAM_RS20030 | Not Available | Negative | 4342113 - 4344962 | 101686.0 |
| ricin domain-containing protein | RAM_RS20035 | Not Available | Negative | 4344980 - 4346341 | 46602.0 |
| dihydrofolate reductase family protein | RAM_RS20040 | Not Available | Negative | 4346512 - 4347072 | 20691.8 |
| beta-l-arabinofuranosidase domain-containing protein | RAM_RS20045 | Not Available | Positive | 4347195 - 4349522 | 82996.5 |
| duf4230 domain-containing protein | RAM_RS20050 | Not Available | Negative | 4349716 - 4350420 | 24951.8 |
| hypothetical protein | RAM_RS49610 | Not Available | Positive | 4350443 - 4350589 | 5168.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
