Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | RAM_RS19960 | Not Available | Negative | 4329237 - 4329725 | 17840.6 |
| fad-dependent monooxygenase | RAM_RS19965 | Not Available | Positive | 4329835 - 4331019 | 42920.8 |
| hypothetical protein | RAM_RS49865 | Not Available | Negative | 4331062 - 4331259 | 6537.02 |
| rok family transcriptional regulator | RAM_RS19975 | Not Available | Positive | 4331431 - 4332633 | 40909.3 |
| rok family protein | RAM_RS19980 | Not Available | Positive | 4332858 - 4333337 | 15708.0 |
| metal-dependent hydrolase | RAM_RS19985 | Not Available | Positive | 4333334 - 4334831 | 55749.8 |
| abc transporter permease | RAM_RS19990 | Not Available | Positive | 4334828 - 4335826 | 34733.3 |
| substrate-binding domain-containing protein | RAM_RS19995 | Not Available | Positive | 4335837 - 4336904 | 36843.8 |
| gfo/idh/moca family protein | RAM_RS20000 | Not Available | Positive | 4336935 - 4338080 | 41024.5 |
| sugar phosphate isomerase/epimerase family protein | RAM_RS20005 | Not Available | Positive | 4338077 - 4339081 | 37729.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
