Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kr domain-containing protein | RAM_RS50335 | Not Available | Negative | 4312735 - 4314564 | 63848.8 |
| metal-dependent hydrolase | RAM_RS51095 | Not Available | Negative | 4315423 - 4316064 | 21442.8 |
| metal-dependent hydrolase | RAM_RS19920 | Not Available | Negative | 4316072 - 4321276 | 187000.0 |
| non-ribosomal peptide synthetase | RAM_RS19925 | Not Available | Negative | 4321273 - 4325106 | 138362.0 |
| sdr family oxidoreductase | RAM_RS19930 | Not Available | Negative | 4325278 - 4325964 | 23807.6 |
| tetr family transcriptional regulator | RAM_RS19935 | Not Available | Positive | 4326043 - 4326612 | 20654.9 |
| expansin exlx1 family cellulose-binding protein | RAM_RS19940 | Not Available | Positive | 4326740 - 4327615 | 29907.4 |
| hypothetical protein | RAM_RS50015 | Not Available | Negative | 4327578 - 4327856 | 10105.2 |
| rna polymerase sigma factor | RAM_RS50340 | Not Available | Negative | 4328030 - 4328236 | 6945.49 |
| alpha/beta fold hydrolase | RAM_RS19955 | Not Available | Positive | 4328428 - 4329213 | 27945.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
