Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ricin domain-containing protein | RAM_RS19775 | Not Available | Positive | 4281364 - 4282839 | 51441.1 |
| hypothetical protein | RAM_RS19780 | Not Available | Negative | 4282867 - 4283994 | 40597.6 |
| metal-dependent hydrolase | RAM_RS50010 | Not Available | Negative | 4284037 - 4284477 | 15953.9 |
| epoxide hydrolase family protein | RAM_RS19790 | Not Available | Negative | 4284526 - 4285689 | 43083.5 |
| cgnr zinc finger domain-containing protein | RAM_RS19795 | Not Available | Positive | 4285772 - 4286335 | 19861.7 |
| enoyl-coa hydratase-related protein | RAM_RS19800 | Not Available | Negative | 4286342 - 4287946 | 57703.9 |
| afsr/sarp family transcriptional regulator | RAM_RS19805 | Not Available | Positive | 4288464 - 4291370 | 101428.0 |
| s26 family signal peptidase | RAM_RS19810 | Not Available | Negative | 4291343 - 4291750 | 14629.7 |
| abc transporter atp-binding protein | RAM_RS19815 | Not Available | Negative | 4291750 - 4293555 | 62373.6 |
| tlpa family protein disulfide reductase | RAM_RS19820 | Not Available | Negative | 4293552 - 4294043 | 17174.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
