Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ricin-type beta-trefoil lectin domain protein | RAM_RS19725 | Not Available | Positive | 4261868 - 4263211 | 45550.8 |
| duf6351 family protein | RAM_RS19730 | Not Available | Positive | 4263319 - 4265469 | 75542.9 |
| beta-ketoacyl synthase n-terminal-like domain-containing protein | RAM_RS19735 | Not Available | Positive | 4265489 - 4271878 | 222440.0 |
| cytochrome p450 | RAM_RS19740 | Not Available | Negative | 4271868 - 4273055 | 42834.6 |
| dm13 domain-containing protein | RAM_RS19745 | Not Available | Negative | 4273124 - 4273714 | 20785.6 |
| zinc-binding dehydrogenase | RAM_RS19750 | Not Available | Positive | 4273926 - 4274918 | 32982.8 |
| hypothetical protein | RAM_RS19755 | Not Available | Positive | 4274915 - 4275094 | 6276.56 |
| rna polymerase subunit sigma-70 | RAM_RS19760 | Not Available | Positive | 4275172 - 4276158 | 35824.7 |
| glycoside hydrolase family 9 protein | RAM_RS19765 | Not Available | Negative | 4276166 - 4278841 | 94497.7 |
| ricin domain-containing protein | RAM_RS19770 | Not Available | Positive | 4279223 - 4281331 | 72591.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
