Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rok family transcriptional regulator | RAM_RS19575 | Not Available | Negative | 4226736 - 4227854 | 37952.3 |
| ybiu family protein | RAM_RS19580 | Not Available | Positive | 4227940 - 4229172 | 45350.9 |
| dipeptidase | RAM_RS19585 | Not Available | Negative | 4229183 - 4230541 | 47470.5 |
| hypothetical protein | RAM_RS19590 | Not Available | Negative | 4230547 - 4230912 | 12641.4 |
| apc family permease | RAM_RS19595 | Not Available | Negative | 4230909 - 4232381 | 52005.7 |
| glycoside hydrolase family 15 protein | RAM_RS19600 | Not Available | Negative | 4232475 - 4234289 | 66309.1 |
| mfs transporter | RAM_RS19605 | Not Available | Positive | 4234431 - 4235831 | 47641.4 |
| metal-dependent hydrolase | RAM_RS50320 | Not Available | Negative | 4235916 - 4236155 | 8508.43 |
| shoct domain-containing protein | RAM_RS19615 | Not Available | Negative | 4236335 - 4236739 | 15303.6 |
| luxr c-terminal-related transcriptional regulator | RAM_RS19620 | Not Available | Negative | 4237001 - 4239610 | 92987.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
