Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase small subunit | RAM_RS19085 | Not Available | Negative | 4117651 - 4118712 | 38317.8 |
| sis domain-containing protein | RAM_RS19090 | Not Available | Negative | 4118709 - 4119392 | 23926.2 |
| hypc/hybg/hupf family hydrogenase formation chaperone | RAM_RS19095 | Not Available | Negative | 4119409 - 4119594 | 6386.54 |
| sis domain-containing protein | RAM_RS19100 | Not Available | Negative | 4119642 - 4120262 | 21954.4 |
| lamg domain-containing protein | RAM_RS19105 | Not Available | Positive | 4120736 - 4127419 | 233561.0 |
| rhs repeat-associated core domain-containing protein | RAM_RS19110 | Not Available | Positive | 4127447 - 4133023 | 198707.0 |
| sdr family nad(p)-dependent oxidoreductase | RAM_RS19115 | Not Available | Negative | 4133113 - 4134051 | 32972.6 |
| metal-dependent hydrolase | RAM_RS47525 | Not Available | Positive | 4134154 - 4134726 | 21430.4 |
| metal-dependent hydrolase | RAM_RS48305 | Not Available | Positive | 4134789 - 4135622 | 30983.3 |
| hypothetical protein | RAM_RS19130 | Not Available | Positive | 4135619 - 4135897 | 9879.79 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
