Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase maturation nickel metallochaperone hypa | RAM_RS19035 | Not Available | Negative | 4109629 - 4109955 | 11527.9 |
| hydrogenase expression/formation protein hype | RAM_RS19040 | Not Available | Negative | 4109955 - 4111031 | 37204.9 |
| hydrogenase formation protein hypd | RAM_RS19045 | Not Available | Negative | 4111028 - 4112155 | 41573.4 |
| hypc/hybg/hupf family hydrogenase formation chaperone | RAM_RS19050 | Not Available | Negative | 4112166 - 4112438 | 9735.69 |
| hydrogenase maturation protease | RAM_RS19055 | Not Available | Negative | 4112442 - 4112927 | 16804.2 |
| hypothetical protein | RAM_RS19060 | Not Available | Negative | 4112924 - 4114075 | 42271.9 |
| duf6084 family protein | RAM_RS19065 | Not Available | Negative | 4114072 - 4114701 | 23456.2 |
| duf5947 family protein | RAM_RS19070 | Not Available | Negative | 4114694 - 4115311 | 22484.8 |
| nifu family protein | RAM_RS19075 | Not Available | Negative | 4115308 - 4115826 | 18706.3 |
| nickel-dependent hydrogenase large subunit | RAM_RS19080 | Not Available | Negative | 4115826 - 4117622 | 67397.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
