Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative quinol monooxygenase | RAM_RS18985 | Not Available | Positive | 4101508 - 4101882 | 13600.2 |
| arsr/smtb family transcription factor | RAM_RS18990 | Not Available | Positive | 4101887 - 4102198 | 11416.6 |
| hypothetical protein | RAM_RS18995 | Not Available | Positive | 4102246 - 4102599 | 13092.5 |
| meds domain-containing protein | RAM_RS19000 | Not Available | Positive | 4102979 - 4103959 | 35068.5 |
| helix-turn-helix domain-containing protein | RAM_RS19005 | Not Available | Negative | 4103992 - 4104507 | 18606.2 |
| hydrogenase small subunit | RAM_RS19010 | Not Available | Positive | 4104631 - 4105650 | 35919.5 |
| nifu family protein | RAM_RS19015 | Not Available | Positive | 4105647 - 4106171 | 17899.6 |
| duf5947 family protein | RAM_RS19020 | Not Available | Positive | 4106168 - 4106782 | 22163.7 |
| carbamoyltransferase hypf | RAM_RS19025 | Not Available | Positive | 4106816 - 4108972 | 77663.8 |
| hydrogenase nickel incorporation protein hypb | RAM_RS19030 | Not Available | Negative | 4108929 - 4109627 | 25255.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
