Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RAM_RS18885 | Not Available | Negative | 4085253 - 4085987 | 25647.2 |
| ydei/ompd-associated family protein | RAM_RS18890 | Not Available | Negative | 4086136 - 4086414 | 10064.0 |
| hypothetical protein | RAM_RS18895 | Not Available | Negative | 4086426 - 4086605 | 6176.17 |
| vanadium-dependent haloperoxidase | RAM_RS18900 | Not Available | Negative | 4086658 - 4087929 | 44376.7 |
| rna polymerase sigma factor | RAM_RS18905 | Not Available | Positive | 4088044 - 4088625 | 21437.7 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | RAM_RS18910 | Not Available | Positive | 4088622 - 4089302 | 23697.4 |
| thaumatin family protein | RAM_RS18915 | Not Available | Negative | 4089330 - 4090079 | 25959.9 |
| glycoside hydrolase family protein | RAM_RS18920 | Not Available | Negative | 4090125 - 4090934 | 28377.4 |
| cysteine/serine endopeptidase inhibitor | RAM_RS18925 | Not Available | Negative | 4091016 - 4091429 | 14328.0 |
| sgnh/gdsl hydrolase family protein | RAM_RS18930 | Not Available | Negative | 4091613 - 4092359 | 25533.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
