Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sh3 domain-containing protein | RAM_RS18470 | Not Available | Positive | 3983204 - 3983581 | 12652.6 |
| duf5937 family protein | RAM_RS18475 | Not Available | Negative | 3983618 - 3984571 | 34391.6 |
| transposase | RAM_RS48570 | Not Available | Negative | 3985205 - 3985321 | 4215.09 |
| alpha/beta fold hydrolase | RAM_RS18480 | Not Available | Negative | 3985373 - 3986392 | 38741.4 |
| lysr family transcriptional regulator | RAM_RS18485 | Not Available | Positive | 3986474 - 3987379 | 31709.1 |
| hypothetical protein | RAM_RS18490 | Not Available | Negative | 3987725 - 3988039 | 10832.9 |
| rhamnogalacturonan acetylesterase | RAM_RS18495 | Not Available | Negative | 3988030 - 3988806 | 27677.9 |
| glycosyl hydrolase 53 family protein | RAM_RS18500 | Not Available | Negative | 3989062 - 3990153 | 38432.8 |
| glycosyl hydrolase 115 family protein | RAM_RS18505 | Not Available | Positive | 3990362 - 3993316 | 107312.0 |
| polysaccharide deacetylase family protein | RAM_RS47510 | Not Available | Positive | 3994026 - 3994748 | 25295.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
