Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | RAM_RS18420 | Not Available | Positive | 3969651 - 3970265 | 22215.1 |
| hypothetical protein | RAM_RS18425 | Not Available | Positive | 3970265 - 3971023 | 26970.2 |
| glycosylhydrolase-like jelly roll fold domain-containing protein | RAM_RS18430 | Not Available | Negative | 3971736 - 3975089 | 119029.0 |
| family 78 glycoside hydrolase catalytic domain | RAM_RS18435 | Not Available | Positive | 3975348 - 3978536 | 113673.0 |
| tetr/acrr family transcriptional regulator | RAM_RS18440 | Not Available | Negative | 3978549 - 3979247 | 25376.3 |
| tetr/acrr family transcriptional regulator | RAM_RS18445 | Not Available | Negative | 3979304 - 3979984 | 24222.2 |
| zinc-binding dehydrogenase | RAM_RS18450 | Not Available | Positive | 3980092 - 3981150 | 37145.0 |
| duf998 domain-containing protein | RAM_RS18455 | Not Available | Positive | 3981187 - 3981900 | 24722.4 |
| nuclear transport factor 2 family protein | RAM_RS18460 | Not Available | Positive | 3981956 - 3982465 | 17546.8 |
| alpha/beta fold hydrolase | RAM_RS18465 | Not Available | Negative | 3982533 - 3982967 | 15170.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
