Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RAM_RS18175 | Not Available | Negative | 3917266 - 3917466 | 7607.09 |
| sigma-70 family rna polymerase sigma factor | RAM_RS18180 | Not Available | Negative | 3917479 - 3918432 | 35365.3 |
| hypothetical protein | RAM_RS18185 | Not Available | Negative | 3918489 - 3919196 | 26517.2 |
| sdr family nad(p)-dependent oxidoreductase | RAM_RS18190 | Not Available | Negative | 3919257 - 3920072 | 28080.9 |
| abc transporter substrate-binding protein | RAM_RS18195 | Not Available | Positive | 3920389 - 3920607 | 8331.91 |
| gh25 family lysozyme | RAM_RS18200 | Not Available | Positive | 3921153 - 3922466 | 45363.3 |
| d-ala-d-ala carboxypeptidase family metallohydrolase | RAM_RS18205 | Not Available | Positive | 3922490 - 3923230 | 25999.3 |
| helix-turn-helix domain-containing protein | RAM_RS18210 | Not Available | Negative | 3923282 - 3924244 | 34506.7 |
| hypothetical protein | RAM_RS18215 | Not Available | Negative | 3924490 - 3924744 | 9031.17 |
| afsr/sarp family transcriptional regulator | RAM_RS18220 | Not Available | Negative | 3925365 - 3928217 | 102645.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
