Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxyacid-oxoacid transhydrogenase | RAM_RS01720 | Not Available | Negative | 353509 - 354789 | 45093.4 |
| thiamine pyrophosphate-binding protein | RAM_RS01725 | Not Available | Positive | 354925 - 356583 | 59055.8 |
| hypothetical protein | RAM_RS49530 | Not Available | Positive | 356787 - 356960 | 5991.71 |
| cold-shock protein | RAM_RS01730 | Not Available | Positive | 357168 - 357371 | 7268.42 |
| heavy-metal-associated domain-containing protein | RAM_RS01735 | Not Available | Positive | 357436 - 357651 | 7455.73 |
| atp-nad kinase family protein | RAM_RS01740 | Not Available | Positive | 357854 - 358888 | 35570.9 |
| thiamine pyrophosphate-dependent enzyme | RAM_RS01745 | Not Available | Positive | 358885 - 359628 | 25920.8 |
| gaf domain-containing protein | RAM_RS01750 | Not Available | Positive | 359726 - 360988 | 44842.9 |
| hypothetical protein | RAM_RS01755 | Not Available | Positive | 361444 - 362862 | 48978.2 |
| glutamate abc transporter substrate-binding protein | RAM_RS01760 | Not Available | Positive | 362994 - 363938 | 33275.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
