Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc-binding dehydrogenase | RAM_RS17725 | Not Available | Positive | 3809682 - 3809972 | 10585.9 |
| tigr01777 family oxidoreductase | RAM_RS17730 | Not Available | Positive | 3810003 - 3810896 | 31278.4 |
| dead/deah box helicase | RAM_RS17735 | Not Available | Positive | 3810995 - 3814012 | 108696.0 |
| hypothetical protein | RAM_RS17740 | Not Available | Positive | 3814005 - 3814736 | 25781.9 |
| nacht domain-containing protein | RAM_RS17745 | Not Available | Negative | 3814802 - 3817861 | 113925.0 |
| uvrd-helicase domain-containing protein | RAM_RS17750 | Not Available | Positive | 3818065 - 3819564 | 54529.9 |
| autotransporter-associated beta strand repeat-containing protein | RAM_RS17755 | Not Available | Positive | 3819727 - 3821976 | 76489.9 |
| alpha-l-arabinofuranosidase b | RAM_RS17760 | Not Available | Positive | 3822186 - 3823694 | 51178.9 |
| alpha-l-arabinofuranosidase b | RAM_RS17765 | Not Available | Positive | 3823745 - 3825301 | 53305.1 |
| mfs transporter | RAM_RS17770 | Not Available | Positive | 3825550 - 3826305 | 26116.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
