Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf305 domain-containing protein | RAM_RS17675 | Not Available | Negative | 3803417 - 3804007 | 20812.3 |
| duf6153 family protein | RAM_RS17680 | Not Available | Negative | 3804066 - 3804476 | 13814.9 |
| hypothetical protein | RAM_RS17685 | Not Available | Negative | 3804609 - 3804917 | 11129.2 |
| hypothetical protein | RAM_RS17690 | Not Available | Positive | 3805137 - 3805544 | 14569.3 |
| flavodoxin family protein | RAM_RS17695 | Not Available | Positive | 3805826 - 3806530 | 25794.3 |
| cation:proton antiporter | RAM_RS17700 | Not Available | Positive | 3806535 - 3807725 | 40071.7 |
| rna polymerase sigma factor | RAM_RS17705 | Not Available | Positive | 3807767 - 3808399 | 22931.3 |
| anti-sigma factor family protein | RAM_RS17710 | Not Available | Positive | 3808399 - 3808629 | 8673.12 |
| srpbcc family protein | RAM_RS17715 | Not Available | Negative | 3808638 - 3809090 | 16625.0 |
| alpha/beta fold hydrolase | RAM_RS17720 | Not Available | Negative | 3809129 - 3809566 | 15610.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
