Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fatty-acid--coa ligase fadd8 | RAM_RS17325 | Not Available | Negative | 3725578 - 3727179 | 57205.8 |
| 5'/3'-nucleotidase sure | RAM_RS17330 | Not Available | Negative | 3727313 - 3728290 | 32830.1 |
| alpha/beta hydrolase domain-containing protein | RAM_RS17335 | Not Available | Negative | 3728428 - 3729828 | 49383.5 |
| sigma-70 family rna polymerase sigma factor | RAM_RS17340 | Not Available | Positive | 3730147 - 3731502 | 46092.6 |
| pqq-dependent sugar dehydrogenase | RAM_RS17345 | Not Available | Negative | 3731534 - 3733837 | 78835.6 |
| zinc-binding alcohol dehydrogenase family protein | RAM_RS17350 | Not Available | Positive | 3734057 - 3735058 | 34755.6 |
| nad(p)h-binding protein | RAM_RS17355 | Not Available | Positive | 3735138 - 3735992 | 29158.8 |
| hypothetical protein | RAM_RS17360 | Not Available | Positive | 3736109 - 3737356 | 43579.7 |
| hypothetical protein | RAM_RS17365 | Not Available | Negative | 3737407 - 3737607 | 7048.35 |
| duf6010 family protein | RAM_RS17370 | Not Available | Negative | 3737609 - 3738022 | 14797.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
