Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family dna-binding transcriptional regulator | RAM_RS17130 | Not Available | Negative | 3682992 - 3684023 | 36127.3 |
| abc transporter substrate-binding protein | RAM_RS17135 | Not Available | Positive | 3684200 - 3685507 | 44962.9 |
| carbohydrate abc transporter permease | RAM_RS17140 | Not Available | Positive | 3685510 - 3686436 | 33368.2 |
| carbohydrate abc transporter permease | RAM_RS17145 | Not Available | Positive | 3686433 - 3687236 | 28280.4 |
| glycoside hydrolase family 127 protein | RAM_RS17150 | Not Available | Positive | 3687250 - 3689130 | 68262.7 |
| ricin domain-containing protein | RAM_RS17155 | Not Available | Positive | 3689249 - 3690334 | 38245.8 |
| ricin domain-containing protein | RAM_RS17160 | Not Available | Positive | 3690356 - 3693037 | 93798.4 |
| beta-l-arabinofuranosidase domain-containing protein | RAM_RS17165 | Not Available | Positive | 3693095 - 3695314 | 78446.2 |
| snapalysin family zinc-dependent metalloprotease | RAM_RS17170 | Not Available | Negative | 3695624 - 3696178 | 19134.1 |
| tetr/acrr family transcriptional regulator | RAM_RS17175 | Not Available | Negative | 3696329 - 3696883 | 19663.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
