Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinofuranosidase catalytic domain-containing protein | RAM_RS16595 | Not Available | Positive | 3559016 - 3560458 | 48614.3 |
| ricin domain-containing protein | RAM_RS16600 | Not Available | Positive | 3560894 - 3562738 | 65611.3 |
| oxygenase mpab family protein | RAM_RS16605 | Not Available | Negative | 3562760 - 3563941 | 42634.9 |
| tetr/acrr family transcriptional regulator | RAM_RS16610 | Not Available | Positive | 3564111 - 3565268 | 41138.5 |
| sige family rna polymerase sigma factor | RAM_RS16615 | Not Available | Positive | 3565318 - 3565836 | 19609.3 |
| hypothetical protein | RAM_RS16620 | Not Available | Positive | 3565833 - 3566645 | 29162.0 |
| hypothetical protein | RAM_RS16625 | Not Available | Negative | 3566649 - 3567086 | 14719.2 |
| sdr family oxidoreductase | RAM_RS16630 | Not Available | Negative | 3567388 - 3568386 | 35648.2 |
| thiamine pyrophosphate-requiring protein | RAM_RS16635 | Not Available | Negative | 3568742 - 3570535 | 64045.3 |
| marr family winged helix-turn-helix transcriptional regulator | RAM_RS16640 | Not Available | Positive | 3570601 - 3571137 | 19381.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
