Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| family 2b encapsulin nanocompartment shell protein | RAM_RS16310 | Not Available | Negative | 3493414 - 3494817 | 51099.2 |
| family 2 encapsulin nanocompartment cargo protein terpene cyclase | RAM_RS16315 | Not Available | Negative | 3494832 - 3495953 | 40279.6 |
| geranyl diphosphate 2-c-methyltransferase | RAM_RS16320 | Not Available | Negative | 3495964 - 3496815 | 31405.0 |
| carbohydrate abc transporter permease | RAM_RS16325 | Not Available | Negative | 3497109 - 3497939 | 30711.9 |
| carbohydrate abc transporter permease | RAM_RS16330 | Not Available | Negative | 3497936 - 3498841 | 33364.0 |
| extracellular solute-binding protein | RAM_RS16335 | Not Available | Negative | 3498838 - 3500172 | 47108.7 |
| duf3152 domain-containing protein | RAM_RS16340 | Not Available | Negative | 3500230 - 3501000 | 26833.9 |
| polysaccharide deacetylase family protein | RAM_RS16345 | Not Available | Negative | 3501509 - 3502516 | 35387.7 |
| hypothetical protein | RAM_RS16350 | Not Available | Positive | 3502679 - 3503656 | 34380.7 |
| hypothetical protein | RAM_RS16355 | Not Available | Negative | 3503801 - 3504271 | 15540.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
