Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RAM_RS50000 | Not Available | Positive | 3485743 - 3486156 | 14463.0 |
| helix-turn-helix domain-containing protein | RAM_RS16270 | Not Available | Positive | 3486156 - 3486770 | 22102.2 |
| nad(p)/fad-dependent oxidoreductase | RAM_RS16275 | Not Available | Positive | 3486823 - 3487989 | 39937.6 |
| (2fe-2s)-binding protein | RAM_RS16280 | Not Available | Positive | 3487986 - 3488252 | 9106.87 |
| nad(p)/fad-dependent oxidoreductase | RAM_RS16285 | Not Available | Positive | 3488249 - 3489532 | 44842.7 |
| dihydrodipicolinate synthase family protein | RAM_RS16290 | Not Available | Positive | 3489529 - 3490440 | 32197.4 |
| proline racemase family protein | RAM_RS16295 | Not Available | Positive | 3490441 - 3491442 | 35770.8 |
| voc family protein | RAM_RS16300 | Not Available | Negative | 3491439 - 3491792 | 12970.2 |
| family 2b encapsulin nanocompartment shell protein | RAM_RS16305 | Not Available | Negative | 3491854 - 3493242 | 51069.8 |
| hypothetical protein | RAM_RS49155 | Not Available | Negative | 3493247 - 3493414 | 5466.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
