Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | RAM_RS16220 | Not Available | Positive | 3477582 - 3478328 | 26012.9 |
| arsr/smtb family transcription factor | RAM_RS16225 | Not Available | Negative | 3478331 - 3479044 | 24864.0 |
| mfs transporter | RAM_RS16230 | Not Available | Positive | 3479156 - 3480352 | 40326.0 |
| lycopene cyclase domain-containing protein | RAM_RS16235 | Not Available | Negative | 3480578 - 3480898 | 11724.5 |
| lycopene cyclase domain-containing protein | RAM_RS16240 | Not Available | Negative | 3480895 - 3481221 | 11786.9 |
| hypothetical protein | RAM_RS16245 | Not Available | Negative | 3481424 - 3481792 | 13328.7 |
| marr family winged helix-turn-helix transcriptional regulator | RAM_RS16250 | Not Available | Negative | 3481789 - 3482325 | 19399.9 |
| phosphocholine-specific phospholipase c | RAM_RS16255 | Not Available | Positive | 3482503 - 3484521 | 73408.5 |
| duf1540 domain-containing protein | RAM_RS16260 | Not Available | Positive | 3484635 - 3484934 | 10180.8 |
| methyltransferase | RAM_RS49995 | Not Available | Negative | 3485109 - 3485573 | 15915.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
