Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | RAM_RS16170 | Not Available | Positive | 3464645 - 3465223 | 21199.6 |
| hypothetical protein | RAM_RS16175 | Not Available | Positive | 3465337 - 3465843 | 17697.1 |
| is630 family transposase | RAM_RS16180 | Not Available | Negative | 3465840 - 3466931 | 41341.7 |
| serine hydrolase domain-containing protein | RAM_RS16185 | Not Available | Negative | 3467000 - 3468115 | 39154.9 |
| cation-translocating p-type atpase | RAM_RS16190 | Not Available | Negative | 3468236 - 3472414 | 142615.0 |
| ykva family protein | RAM_RS16195 | Not Available | Positive | 3472644 - 3473063 | 15083.1 |
| tigr03619 family f420-dependent llm class oxidoreductase | RAM_RS16200 | Not Available | Positive | 3473090 - 3473947 | 30337.3 |
| lysr family transcriptional regulator | RAM_RS16205 | Not Available | Negative | 3473940 - 3474875 | 33406.3 |
| succinate dehydrogenase cytochrome b subunit | RAM_RS16210 | Not Available | Positive | 3474957 - 3475661 | 26144.5 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | RAM_RS16215 | Not Available | Positive | 3475663 - 3477585 | 70663.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
