Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dha2 family efflux mfs transporter permease subunit | RAM_RS16015 | Not Available | Positive | 3431849 - 3433258 | 47503.0 |
| isocitrate lyase/pep mutase family protein | RAM_RS16020 | Not Available | Positive | 3433263 - 3434039 | 26311.4 |
| maleylpyruvate isomerase family mycothiol-dependent enzyme | RAM_RS16025 | Not Available | Positive | 3434026 - 3434589 | 18997.9 |
| rna polymerase subunit sigma-70 | RAM_RS16030 | Not Available | Positive | 3434607 - 3435554 | 34207.9 |
| hypothetical protein | RAM_RS16035 | Not Available | Negative | 3435551 - 3436033 | 16672.8 |
| hypothetical protein | RAM_RS49595 | Not Available | Negative | 3436044 - 3436208 | 5918.35 |
| bacteriophage spanin2 family protein | RAM_RS16045 | Not Available | Negative | 3436466 - 3436837 | 12155.4 |
| terc family protein | RAM_RS16050 | Not Available | Negative | 3436840 - 3437763 | 33594.9 |
| helix-turn-helix transcriptional regulator | RAM_RS16055 | Not Available | Positive | 3437948 - 3438238 | 10651.9 |
| glycoside hydrolase family 13 protein | RAM_RS16060 | Not Available | Negative | 3438244 - 3439884 | 60356.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
