Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RAM_RS15965 | Not Available | Negative | 3423073 - 3423513 | 16266.0 |
| nad-dependent dna ligase liga | RAM_RS15970 | Not Available | Negative | 3423616 - 3425607 | 70875.4 |
| llm class f420-dependent oxidoreductase | RAM_RS15975 | Not Available | Positive | 3425736 - 3426575 | 30637.4 |
| peroxiredoxin family protein | RAM_RS15980 | Not Available | Negative | 3426585 - 3427043 | 16004.2 |
| rna polymerase sigma factor | RAM_RS15985 | Not Available | Negative | 3427071 - 3427586 | 18703.6 |
| roadblock/lc7 domain-containing protein | RAM_RS15990 | Not Available | Positive | 3428055 - 3428423 | 12608.3 |
| hypothetical protein | RAM_RS15995 | Not Available | Positive | 3428467 - 3428838 | 13518.3 |
| hypothetical protein | RAM_RS16000 | Not Available | Positive | 3428845 - 3429513 | 24348.6 |
| epoxide hydrolase family protein | RAM_RS16005 | Not Available | Negative | 3429534 - 3430682 | 41823.2 |
| helix-turn-helix transcriptional regulator | RAM_RS16010 | Not Available | Positive | 3430741 - 3431691 | 34551.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
