Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent oxidoreductase | RAM_RS15680 | Not Available | Negative | 3357229 - 3358101 | 30405.2 |
| hd domain-containing protein | RAM_RS15685 | Not Available | Negative | 3358103 - 3358693 | 21199.1 |
| lytic polysaccharide monooxygenase | RAM_RS15690 | Not Available | Negative | 3358795 - 3359454 | 24006.2 |
| hypothetical protein | RAM_RS47475 | Not Available | Positive | 3359862 - 3360146 | 10392.6 |
| mbl fold metallo-hydrolase | RAM_RS15695 | Not Available | Negative | 3360373 - 3361179 | 29894.0 |
| duf3618 domain-containing protein | RAM_RS15700 | Not Available | Negative | 3361267 - 3361878 | 21290.7 |
| phage holin family protein | RAM_RS15705 | Not Available | Negative | 3361875 - 3362303 | 14934.2 |
| hypothetical protein | RAM_RS15710 | Not Available | Negative | 3362303 - 3363256 | 31847.7 |
| merr family transcriptional regulator | RAM_RS15715 | Not Available | Negative | 3363335 - 3364162 | 28784.9 |
| srpbcc family protein | RAM_RS15720 | Not Available | Negative | 3364171 - 3364635 | 17453.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
