Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | RAM_RS15580 | Not Available | Positive | 3297066 - 3297923 | 30379.1 |
| alpha-l-fucosidase | RAM_RS15585 | Not Available | Positive | 3297974 - 3300223 | 79827.4 |
| fadr/gntr family transcriptional regulator | RAM_RS15590 | Not Available | Negative | 3300270 - 3300983 | 25587.7 |
| nuclear transport factor 2 family protein | RAM_RS15595 | Not Available | Positive | 3301159 - 3301578 | 15416.8 |
| tetr/acrr family transcriptional regulator | RAM_RS15600 | Not Available | Positive | 3301575 - 3302126 | 19356.3 |
| laci family dna-binding transcriptional regulator | RAM_RS15605 | Not Available | Positive | 3302742 - 3303764 | 35760.9 |
| substrate-binding domain-containing protein | RAM_RS15610 | Not Available | Positive | 3304026 - 3304907 | 31123.0 |
| amp-binding protein | RAM_RS15615 | Not Available | Positive | 3305126 - 3307141 | 72608.7 |
| alpha/beta hydrolase | RAM_RS15620 | Not Available | Negative | 3307148 - 3308560 | 50245.0 |
| histone-like nucleoid-structuring protein lsr2 | RAM_RS15625 | Not Available | Negative | 3308815 - 3309213 | 14454.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
