Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase | RAM_RS47470 | Not Available | Negative | 3287144 - 3287551 | 13933.9 |
| nickel pincer cofactor biosynthesis protein larb | RAM_RS15535 | Not Available | Negative | 3287548 - 3288219 | 22580.3 |
| nickel-dependent lactate racemase | RAM_RS15540 | Not Available | Negative | 3288216 - 3289496 | 45212.1 |
| amidohydrolase family protein | RAM_RS15545 | Not Available | Negative | 3289493 - 3290335 | 30052.8 |
| fumarylacetoacetate hydrolase family protein | RAM_RS15550 | Not Available | Negative | 3290332 - 3291183 | 30376.8 |
| enolase c-terminal domain-like protein | RAM_RS15555 | Not Available | Positive | 3291376 - 3292689 | 47411.6 |
| sdr family nad(p)-dependent oxidoreductase | RAM_RS15560 | Not Available | Positive | 3292686 - 3293459 | 26196.2 |
| sugar abc transporter substrate-binding protein | RAM_RS15565 | Not Available | Positive | 3293456 - 3294523 | 37416.6 |
| sugar abc transporter atp-binding protein | RAM_RS15570 | Not Available | Positive | 3294549 - 3296048 | 53242.9 |
| abc transporter permease | RAM_RS15575 | Not Available | Positive | 3296041 - 3297066 | 35108.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
