Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | RAM_RS15440 | Not Available | Negative | 3268142 - 3268999 | 29762.1 |
| winged helix-turn-helix transcriptional regulator | RAM_RS15445 | Not Available | Positive | 3269144 - 3269536 | 14032.8 |
| hypothetical protein | RAM_RS15450 | Not Available | Negative | 3269544 - 3270146 | 20553.2 |
| alpha-l-arabinofuranosidase b | RAM_RS15455 | Not Available | Positive | 3270455 - 3272011 | 53827.1 |
| arabinan endo-1,5-alpha-l-arabinosidase | RAM_RS50255 | Not Available | Positive | 3272376 - 3272549 | 5574.65 |
| gdsl-type esterase/lipase family protein | RAM_RS15465 | Not Available | Positive | 3272614 - 3273852 | 42660.3 |
| hypothetical protein | RAM_RS49150 | Not Available | Negative | 3273867 - 3274025 | 5454.51 |
| laci family dna-binding transcriptional regulator | RAM_RS15470 | Not Available | Negative | 3274143 - 3275156 | 35695.7 |
| abc transporter substrate-binding protein | RAM_RS15475 | Not Available | Positive | 3275320 - 3276567 | 42191.5 |
| carbohydrate abc transporter permease | RAM_RS15480 | Not Available | Positive | 3276576 - 3277520 | 34495.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
