Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase family protein | RAM_RS15035 | Not Available | Positive | 3194940 - 3195401 | 17309.6 |
| rok family transcriptional regulator | RAM_RS15040 | Not Available | Negative | 3195398 - 3196597 | 40768.9 |
| duf427 domain-containing protein | RAM_RS15045 | Not Available | Positive | 3196698 - 3197438 | 27451.5 |
| carotenoid oxygenase family protein | RAM_RS15050 | Not Available | Negative | 3197444 - 3198724 | 47344.6 |
| hypothetical protein | RAM_RS15055 | Not Available | Negative | 3198721 - 3199281 | 20263.0 |
| padr family transcriptional regulator | RAM_RS15060 | Not Available | Positive | 3199372 - 3199884 | 19222.9 |
| zf-hc2 domain-containing protein | RAM_RS15065 | Not Available | Negative | 3199916 - 3200602 | 23635.4 |
| sigma-70 family rna polymerase sigma factor | RAM_RS15070 | Not Available | Positive | 3200660 - 3201211 | 20065.8 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | RAM_RS15075 | Not Available | Positive | 3201376 - 3203622 | 79376.3 |
| (2fe-2s)-binding protein | RAM_RS15080 | Not Available | Positive | 3203634 - 3204092 | 16387.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
