Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding transpeptidase domain-containing protein | RAM_RS14935 | Not Available | Positive | 3169548 - 3171173 | 54745.8 |
| arsr/smtb family transcription factor | RAM_RS14940 | Not Available | Positive | 3171388 - 3172080 | 23959.1 |
| potassium/proton antiporter | RAM_RS14945 | Not Available | Positive | 3172178 - 3173656 | 51281.9 |
| aminotransferase class v-fold plp-dependent enzyme | RAM_RS14950 | Not Available | Positive | 3173889 - 3175232 | 47823.1 |
| hypothetical protein | RAM_RS50245 | Not Available | Positive | 3175496 - 3175846 | 12380.7 |
| signal peptidase ii | RAM_RS14960 | Not Available | Positive | 3175873 - 3176655 | 26994.9 |
| rlua family pseudouridine synthase | RAM_RS14965 | Not Available | Positive | 3176652 - 3177581 | 33236.8 |
| asnc family protein | RAM_RS14970 | Not Available | Negative | 3177578 - 3178579 | 34864.1 |
| duf885 domain-containing protein | RAM_RS14975 | Not Available | Positive | 3178714 - 3185343 | 242227.0 |
| fumarylacetoacetase | RAM_RS14980 | Not Available | Positive | 3185307 - 3186551 | 44134.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
