Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | RAM_RS14835 | Not Available | Positive | 3150161 - 3150964 | 29300.6 |
| osmc family peroxiredoxin | RAM_RS14840 | Not Available | Negative | 3151042 - 3151476 | 14501.9 |
| marr family winged helix-turn-helix transcriptional regulator | RAM_RS14845 | Not Available | Negative | 3151517 - 3151960 | 16182.5 |
| dinb family protein | RAM_RS14850 | Not Available | Positive | 3152038 - 3152544 | 18888.1 |
| duf1295 domain-containing protein | RAM_RS14855 | Not Available | Negative | 3152531 - 3153292 | 28176.9 |
| sam-dependent methyltransferase | RAM_RS14860 | Not Available | Negative | 3153295 - 3154560 | 46369.6 |
| nad(p)/fad-dependent oxidoreductase | RAM_RS14865 | Not Available | Positive | 3154643 - 3155911 | 45839.4 |
| duf1365 domain-containing protein | RAM_RS14870 | Not Available | Positive | 3155905 - 3156639 | 27626.6 |
| ecf rna polymerase sigma factor sigk | RAM_RS14875 | Not Available | Positive | 3156632 - 3157246 | 23009.4 |
| anti-sigma factor domain-containing protein | RAM_RS14880 | Not Available | Positive | 3157258 - 3158013 | 25612.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
