Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| srpbcc family protein | RAM_RS14395 | Not Available | Positive | 3046705 - 3047340 | 22928.8 |
| pasta domain-containing protein | RAM_RS14400 | Not Available | Negative | 3047337 - 3047687 | 11976.0 |
| deoxyguanosinetriphosphate triphosphohydrolase family protein | RAM_RS14405 | Not Available | Positive | 3047761 - 3049323 | 55899.9 |
| s8 family serine peptidase | RAM_RS14410 | Not Available | Positive | 3050015 - 3052903 | 96841.8 |
| acvlrf1 family peptidyl-trna hydrolase | RAM_RS14415 | Not Available | Positive | 3052964 - 3053611 | 23092.6 |
| abc-f family atp-binding cassette domain-containing protein | RAM_RS14420 | Not Available | Positive | 3053749 - 3055377 | 58331.5 |
| helix-turn-helix domain-containing protein | RAM_RS14425 | Not Available | Positive | 3055556 - 3055765 | 7506.13 |
| glycosyltransferase 87 family protein | RAM_RS14430 | Not Available | Negative | 3055752 - 3057134 | 48030.5 |
| llm class flavin-dependent oxidoreductase | RAM_RS14435 | Not Available | Negative | 3057168 - 3058022 | 30621.7 |
| marr family winged helix-turn-helix transcriptional regulator | RAM_RS14440 | Not Available | Positive | 3058094 - 3058525 | 15538.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
