Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | RAM_RS14240 | Not Available | Negative | 3018014 - 3018940 | 32610.5 |
| polyprenol phosphomannose-dependent alpha 1,6 mannosyltransferase mptb | RAM_RS14245 | Not Available | Negative | 3018947 - 3020578 | 57593.3 |
| helix-turn-helix transcriptional regulator | RAM_RS14250 | Not Available | Positive | 3020738 - 3021550 | 28541.9 |
| fe-s cluster assembly protein sufb | RAM_RS14255 | Not Available | Positive | 3021547 - 3022995 | 53721.4 |
| fe-s cluster assembly protein sufd | RAM_RS14260 | Not Available | Positive | 3022998 - 3024170 | 42100.4 |
| fe-s cluster assembly atpase sufc | RAM_RS14265 | Not Available | Positive | 3024199 - 3024969 | 27846.4 |
| cysteine desulfurase | RAM_RS14270 | Not Available | Positive | 3025010 - 3026299 | 45466.2 |
| fe-s cluster assembly sulfur transfer protein sufu | RAM_RS14275 | Not Available | Positive | 3026296 - 3026745 | 16224.1 |
| metal-sulfur cluster assembly factor | RAM_RS14280 | Not Available | Positive | 3026742 - 3027143 | 14526.9 |
| duf4184 family protein | RAM_RS14285 | Not Available | Negative | 3027151 - 3027927 | 27790.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
