Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pqq-dependent sugar dehydrogenase | RAM_RS14045 | Not Available | Negative | 2974310 - 2976943 | 90163.0 |
| coproporphyrinogen iii oxidase | RAM_RS14050 | Not Available | Negative | 2977193 - 2978026 | 30723.0 |
| ppox class f420-dependent oxidoreductase | RAM_RS14055 | Not Available | Negative | 2978065 - 2978502 | 16207.3 |
| hypothetical protein | RAM_RS14060 | Not Available | Positive | 2978589 - 2980046 | 53408.4 |
| hypothetical protein | RAM_RS14065 | Not Available | Positive | 2980046 - 2980846 | 28595.8 |
| hypothetical protein | RAM_RS14070 | Not Available | Positive | 2980858 - 2985324 | 160741.0 |
| tigr03620 family f420-dependent llm class oxidoreductase | RAM_RS14075 | Not Available | Positive | 2985362 - 2986147 | 27712.1 |
| yybh family protein | RAM_RS14080 | Not Available | Negative | 2986144 - 2986626 | 17525.4 |
| arsr/smtb family transcription factor | RAM_RS14085 | Not Available | Positive | 2986662 - 2987006 | 12377.0 |
| lyse family translocator | RAM_RS14090 | Not Available | Negative | 2986987 - 2987631 | 21863.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
