Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose pts transporter subunit eiib | RAM_RS13745 | Not Available | Positive | 2915497 - 2915736 | 8276.0 |
| pts glucose transporter subunit iia | RAM_RS13750 | Not Available | Positive | 2915733 - 2916188 | 15508.5 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | RAM_RS13755 | Not Available | Negative | 2916321 - 2916758 | 14090.9 |
| hypothetical protein | RAM_RS13760 | Not Available | Positive | 2916864 - 2917232 | 12949.0 |
| sigma-70 family rna polymerase sigma factor | RAM_RS13765 | Not Available | Positive | 2917237 - 2917749 | 18938.5 |
| anti-sigma factor family protein | RAM_RS13770 | Not Available | Positive | 2917746 - 2918405 | 22922.8 |
| chorismate synthase | RAM_RS13775 | Not Available | Positive | 2918693 - 2919880 | 41868.0 |
| shikimate kinase | RAM_RS13780 | Not Available | Positive | 2919877 - 2920401 | 17917.4 |
| 3-dehydroquinate synthase | RAM_RS13785 | Not Available | Positive | 2920410 - 2921519 | 38502.5 |
| type ii 3-dehydroquinate dehydratase | RAM_RS13790 | Not Available | Positive | 2921516 - 2921947 | 15290.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
