Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| llm class f420-dependent oxidoreductase | RAM_RS13545 | Not Available | Positive | 2870734 - 2871684 | 34065.8 |
| fluoride efflux transporter crcb | RAM_RS13550 | Not Available | Negative | 2871689 - 2872063 | 13014.0 |
| duf190 domain-containing protein | RAM_RS13555 | Not Available | Negative | 2872060 - 2872392 | 12239.8 |
| fluoride efflux transporter fluc | RAM_RS13560 | Not Available | Negative | 2872392 - 2872793 | 13542.0 |
| pyridoxal phosphate-dependent decarboxylase family protein | RAM_RS13565 | Not Available | Positive | 2872936 - 2874537 | 53531.6 |
| lysine n(6)-hydroxylase/l-ornithine n(5)-oxygenase family protein | RAM_RS13570 | Not Available | Positive | 2874534 - 2875811 | 45628.2 |
| iuca/iucc family protein | RAM_RS13575 | Not Available | Positive | 2875808 - 2877538 | 63506.5 |
| glutamine synthetase | RAM_RS13580 | Not Available | Positive | 2877535 - 2878842 | 45549.1 |
| fad-binding oxidoreductase | RAM_RS13585 | Not Available | Negative | 2879026 - 2880414 | 49843.9 |
| atp-binding protein | RAM_RS13590 | Not Available | Negative | 2880497 - 2883490 | 106111.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
