Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | RAM_RS13295 | Not Available | Negative | 2825285 - 2826754 | 50627.8 |
| tetr/acrr family transcriptional regulator | RAM_RS13300 | Not Available | Positive | 2826931 - 2827596 | 22821.3 |
| ribonuclease d | RAM_RS13305 | Not Available | Negative | 2827622 - 2828845 | 44319.9 |
| response regulator | RAM_RS13310 | Not Available | Negative | 2828944 - 2829660 | 24767.8 |
| duf3000 domain-containing protein | RAM_RS13315 | Not Available | Negative | 2830382 - 2830945 | 20005.8 |
| uroporphyrinogen decarboxylase | RAM_RS13320 | Not Available | Positive | 2831034 - 2832104 | 38104.1 |
| protoporphyrinogen oxidase | RAM_RS13325 | Not Available | Positive | 2832101 - 2833501 | 47102.9 |
| hydrogen peroxide-dependent heme synthase | RAM_RS13330 | Not Available | Positive | 2833559 - 2834251 | 26374.2 |
| coa transferase | RAM_RS13335 | Not Available | Positive | 2834251 - 2835588 | 47054.9 |
| hypothetical protein | RAM_RS13340 | Not Available | Negative | 2835732 - 2836070 | 12637.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
