Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | RAM_RS13145 | Not Available | Negative | 2788494 - 2789177 | 22806.3 |
| ob-fold nucleic acid binding domain-containing protein | RAM_RS13150 | Not Available | Positive | 2789313 - 2789693 | 13989.7 |
| duf3159 domain-containing protein | RAM_RS13155 | Not Available | Positive | 2789703 - 2790425 | 26433.2 |
| potassium channel family protein | RAM_RS13160 | Not Available | Negative | 2790605 - 2791261 | 23434.1 |
| potassium channel family protein | RAM_RS13165 | Not Available | Negative | 2791258 - 2791971 | 25565.5 |
| apc family permease | RAM_RS13170 | Not Available | Positive | 2792016 - 2794049 | 73189.9 |
| class i sam-dependent rna methyltransferase | RAM_RS13175 | Not Available | Positive | 2794046 - 2795233 | 41705.5 |
| tigr03086 family metal-binding protein | RAM_RS13180 | Not Available | Positive | 2795266 - 2795829 | 19614.1 |
| aldehyde dehydrogenase family protein | RAM_RS13185 | Not Available | Negative | 2796257 - 2797726 | 51988.4 |
| 1-deoxy-d-xylulose-5-phosphate synthase | RAM_RS13190 | Not Available | Positive | 2797902 - 2799815 | 67371.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
