Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa synthetase | RAM_RS12895 | Not Available | Positive | 2725462 - 2727078 | 57811.2 |
| nad(p)h-dependent flavin oxidoreductase | RAM_RS12900 | Not Available | Positive | 2727116 - 2728216 | 38574.5 |
| s1 family peptidase | RAM_RS12905 | Not Available | Negative | 2728268 - 2729074 | 27290.2 |
| apc family permease | RAM_RS12910 | Not Available | Negative | 2729199 - 2730416 | 40872.0 |
| gntr family transcriptional regulator | RAM_RS12915 | Not Available | Positive | 2730497 - 2731258 | 27718.3 |
| hypothetical protein | RAM_RS12920 | Not Available | Positive | 2731299 - 2731826 | 17523.2 |
| hypothetical protein | RAM_RS12925 | Not Available | Positive | 2731947 - 2732438 | 16654.0 |
| hypothetical protein | RAM_RS12930 | Not Available | Positive | 2732642 - 2733313 | 22405.3 |
| fumarate hydratase | RAM_RS12935 | Not Available | Negative | 2733362 - 2735020 | 59996.4 |
| sigma-70 family rna polymerase sigma factor | RAM_RS12940 | Not Available | Negative | 2735665 - 2736696 | 38338.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
